Protein–RNA interactions for Protein: P58283

Rnf216, E3 ubiquitin-protein ligase RNF216, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf216P58283 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf216P58283 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf216P58283 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf216P58283 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf216P58283 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf216P58283 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf216P58283 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf216P58283 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.14■■□□□ 1.13
Rnf216P58283 Gm7514-201ENSMUST00000209475 934 ntBASIC22.14■■□□□ 1.13
Rnf216P58283 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Rnf216P58283 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf216P58283 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.13■■□□□ 1.13
Rnf216P58283 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.13■■□□□ 1.13
Rnf216P58283 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.13■■□□□ 1.13
Rnf216P58283 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.13■■□□□ 1.13
Rnf216P58283 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.13■■□□□ 1.13
Rnf216P58283 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rnf216P58283 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf216P58283 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf216P58283 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf216P58283 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf216P58283 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Rnf216P58283 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.12■■□□□ 1.13
Rnf216P58283 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rnf216P58283 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.12■■□□□ 1.13
Rnf216P58283 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rnf216P58283 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.11■■□□□ 1.13
Rnf216P58283 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Gm13146-201ENSMUST00000118508 780 ntBASIC22.11■■□□□ 1.13
Rnf216P58283 Gm12933-201ENSMUST00000120203 872 ntBASIC22.11■■□□□ 1.13
Rnf216P58283 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.11■■□□□ 1.13
Rnf216P58283 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.11■■□□□ 1.13
Rnf216P58283 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rnf216P58283 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.11■■□□□ 1.13
Rnf216P58283 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf216P58283 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.1■■□□□ 1.13
Rnf216P58283 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf216P58283 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.09■■□□□ 1.13
Rnf216P58283 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Rnf216P58283 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rnf216P58283 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf216P58283 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.08■■□□□ 1.13
Rnf216P58283 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf216P58283 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rnf216P58283 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf216P58283 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
Rnf216P58283 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf216P58283 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rnf216P58283 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.07■■□□□ 1.12
Rnf216P58283 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf216P58283 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.07■■□□□ 1.12
Rnf216P58283 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf216P58283 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf216P58283 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rnf216P58283 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf216P58283 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf216P58283 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.06■■□□□ 1.12
Rnf216P58283 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf216P58283 Gm10602-201ENSMUST00000098239 609 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms