Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFAIP3P21580 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFAIP3P21580 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.28■■□□□ 1.32
TNFAIP3P21580 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TNFAIP3P21580 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNFAIP3P21580 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TNFAIP3P21580 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
TNFAIP3P21580 FBXW4P1-201ENST00000426721 2239 ntBASIC23.27■■□□□ 1.31
TNFAIP3P21580 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFAIP3P21580 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFAIP3P21580 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFAIP3P21580 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFAIP3P21580 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFAIP3P21580 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFAIP3P21580 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFAIP3P21580 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFAIP3P21580 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.25■■□□□ 1.31
TNFAIP3P21580 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNFAIP3P21580 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TNFAIP3P21580 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFAIP3P21580 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFAIP3P21580 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFAIP3P21580 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFAIP3P21580 SRD5A1P1-201ENST00000442297 786 ntBASIC23.24■■□□□ 1.31
TNFAIP3P21580 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFAIP3P21580 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.24■■□□□ 1.31
TNFAIP3P21580 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFAIP3P21580 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TNFAIP3P21580 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFAIP3P21580 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TNFAIP3P21580 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.23■■□□□ 1.31
TNFAIP3P21580 MIR3181-201ENST00000578512 73 ntBASIC23.23■■□□□ 1.31
TNFAIP3P21580 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFAIP3P21580 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TNFAIP3P21580 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.22■■□□□ 1.31
TNFAIP3P21580 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 AL356441.2-201ENST00000443009 864 ntBASIC23.22■■□□□ 1.31
TNFAIP3P21580 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFAIP3P21580 AL031602.1-201ENST00000633169 911 ntBASIC23.22■■□□□ 1.31
TNFAIP3P21580 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFAIP3P21580 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TNFAIP3P21580 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFAIP3P21580 AL512631.2-201ENST00000604634 923 ntBASIC23.21■■□□□ 1.31
TNFAIP3P21580 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFAIP3P21580 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFAIP3P21580 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TNFAIP3P21580 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 AC092171.4-201ENST00000609130 632 ntBASIC23.2■■□□□ 1.3
TNFAIP3P21580 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFAIP3P21580 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms