Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.57■□□□□ 0.88
Kcnu1O54982 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.57■□□□□ 0.88
Kcnu1O54982 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Kcnu1O54982 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.57■□□□□ 0.88
Kcnu1O54982 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.57■□□□□ 0.88
Kcnu1O54982 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Kcnu1O54982 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kcnu1O54982 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.56■□□□□ 0.88
Kcnu1O54982 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.56■□□□□ 0.88
Kcnu1O54982 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Kcnu1O54982 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Kcnu1O54982 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kcnu1O54982 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Kcnu1O54982 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.55■□□□□ 0.88
Kcnu1O54982 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.55■□□□□ 0.88
Kcnu1O54982 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kcnu1O54982 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.54■□□□□ 0.88
Kcnu1O54982 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Kcnu1O54982 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kcnu1O54982 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kcnu1O54982 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.53■□□□□ 0.88
Kcnu1O54982 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.53■□□□□ 0.88
Kcnu1O54982 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.53■□□□□ 0.88
Kcnu1O54982 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Kcnu1O54982 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Kcnu1O54982 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.53■□□□□ 0.88
Kcnu1O54982 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kcnu1O54982 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Kcnu1O54982 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.52■□□□□ 0.88
Kcnu1O54982 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kcnu1O54982 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Kcnu1O54982 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcnu1O54982 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kcnu1O54982 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcnu1O54982 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcnu1O54982 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.51■□□□□ 0.87
Kcnu1O54982 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.51■□□□□ 0.87
Kcnu1O54982 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Kcnu1O54982 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kcnu1O54982 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.51■□□□□ 0.87
Kcnu1O54982 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.5■□□□□ 0.87
Kcnu1O54982 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Kcnu1O54982 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Kcnu1O54982 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcnu1O54982 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Kcnu1O54982 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.49■□□□□ 0.87
Kcnu1O54982 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.49■□□□□ 0.87
Kcnu1O54982 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcnu1O54982 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms