Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.23■□□□□ 0.35
Lsm2O35900 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Lsm2O35900 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm2O35900 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Lsm2O35900 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.22■□□□□ 0.35
Lsm2O35900 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lsm2O35900 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.22■□□□□ 0.35
Lsm2O35900 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.22■□□□□ 0.35
Lsm2O35900 Gm43566-201ENSMUST00000196851 808 ntBASIC17.22■□□□□ 0.35
Lsm2O35900 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Lsm2O35900 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm2O35900 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lsm2O35900 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm2O35900 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Lsm2O35900 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lsm2O35900 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm2O35900 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.21■□□□□ 0.35
Lsm2O35900 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsm2O35900 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Lsm2O35900 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm2O35900 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Mir6538-201ENSMUST00000183713 110 ntBASIC17.2■□□□□ 0.34
Lsm2O35900 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm2O35900 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lsm2O35900 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lsm2O35900 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm2O35900 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.19■□□□□ 0.34
Lsm2O35900 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.19■□□□□ 0.34
Lsm2O35900 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.19■□□□□ 0.34
Lsm2O35900 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.19■□□□□ 0.34
Lsm2O35900 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lsm2O35900 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lsm2O35900 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm2O35900 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.19■□□□□ 0.34
Lsm2O35900 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lsm2O35900 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lsm2O35900 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm2O35900 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lsm2O35900 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.17■□□□□ 0.34
Lsm2O35900 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.17■□□□□ 0.34
Lsm2O35900 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm2O35900 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.16■□□□□ 0.34
Lsm2O35900 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm2O35900 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms