Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MID1O15344 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MID1O15344 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.87■■□□□ 1.09
MID1O15344 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.87■■□□□ 1.09
MID1O15344 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.87■■□□□ 1.09
MID1O15344 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.87■■□□□ 1.09
MID1O15344 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.87■■□□□ 1.09
MID1O15344 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MID1O15344 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MID1O15344 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.87■■□□□ 1.09
MID1O15344 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MID1O15344 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MID1O15344 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MID1O15344 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MID1O15344 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.86■■□□□ 1.09
MID1O15344 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.86■■□□□ 1.09
MID1O15344 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.86■■□□□ 1.09
MID1O15344 AC004854.2-201ENST00000608450 1441 ntBASIC21.86■■□□□ 1.09
MID1O15344 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
MID1O15344 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MID1O15344 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.85■■□□□ 1.09
MID1O15344 AP004607.4-201ENST00000530158 1459 ntBASIC21.85■■□□□ 1.09
MID1O15344 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MID1O15344 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.85■■□□□ 1.09
MID1O15344 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MID1O15344 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MID1O15344 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MID1O15344 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 LINC01960-201ENST00000563759 1884 ntBASIC21.84■■□□□ 1.09
MID1O15344 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.84■■□□□ 1.09
MID1O15344 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.84■■□□□ 1.09
MID1O15344 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.84■■□□□ 1.09
MID1O15344 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.84■■□□□ 1.09
MID1O15344 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MID1O15344 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.83■■□□□ 1.09
MID1O15344 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MID1O15344 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
MID1O15344 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.83■■□□□ 1.09
MID1O15344 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.83■■□□□ 1.09
MID1O15344 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
MID1O15344 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.83■■□□□ 1.08
MID1O15344 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
MID1O15344 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MID1O15344 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
MID1O15344 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
MID1O15344 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MID1O15344 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MID1O15344 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MID1O15344 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.82■■□□□ 1.08
MID1O15344 AC093323.1-202ENST00000635031 2045 ntBASIC21.82■■□□□ 1.08
MID1O15344 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MID1O15344 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
MID1O15344 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MID1O15344 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MID1O15344 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MID1O15344 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MID1O15344 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.81■■□□□ 1.08
MID1O15344 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.81■■□□□ 1.08
MID1O15344 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MID1O15344 AC137761.2-201ENST00000561729 223 ntBASIC21.81■■□□□ 1.08
MID1O15344 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.81■■□□□ 1.08
MID1O15344 AC145350.3-201ENST00000569033 163 ntBASIC21.81■■□□□ 1.08
MID1O15344 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.81■■□□□ 1.08
MID1O15344 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
MID1O15344 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.8■■□□□ 1.08
MID1O15344 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MID1O15344 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.8■■□□□ 1.08
MID1O15344 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MID1O15344 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.8■■□□□ 1.08
MID1O15344 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MID1O15344 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MID1O15344 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
MID1O15344 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
MID1O15344 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MID1O15344 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.79■■□□□ 1.08
MID1O15344 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MID1O15344 AC016769.1-201ENST00000409132 1010 ntBASIC21.79■■□□□ 1.08
MID1O15344 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.79■■□□□ 1.08
MID1O15344 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.79■■□□□ 1.08
MID1O15344 AC079140.4-201ENST00000507448 529 ntBASIC21.79■■□□□ 1.08
MID1O15344 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.79■■□□□ 1.08
MID1O15344 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MID1O15344 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.79■■□□□ 1.08
MID1O15344 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.79■■□□□ 1.08
MID1O15344 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MID1O15344 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms