Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.95■□□□□ 0.94
SLC28A1O00337 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC28A1O00337 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC28A1O00337 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A1O00337 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A1O00337 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A1O00337 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC28A1O00337 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SLC28A1O00337 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SLC28A1O00337 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 AC007375.3-201ENST00000600936 2314 ntBASIC20.94■□□□□ 0.94
SLC28A1O00337 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SLC28A1O00337 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A1O00337 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 AL356740.2-201ENST00000601559 647 ntBASIC20.93■□□□□ 0.94
SLC28A1O00337 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SLC28A1O00337 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC28A1O00337 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 AC133637.1-201ENST00000624115 1537 ntBASIC20.93■□□□□ 0.94
SLC28A1O00337 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A1O00337 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A1O00337 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC28A1O00337 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC28A1O00337 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A1O00337 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC28A1O00337 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A1O00337 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A1O00337 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A1O00337 AC010542.4-201ENST00000563151 1910 ntBASIC20.92■□□□□ 0.94
SLC28A1O00337 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC28A1O00337 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC28A1O00337 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC28A1O00337 pRNA.6-201ENST00000610482 90 ntBASIC20.91■□□□□ 0.94
SLC28A1O00337 pRNA.5-201ENST00000612139 90 ntBASIC20.91■□□□□ 0.94
SLC28A1O00337 pRNA.11-201ENST00000618423 90 ntBASIC20.91■□□□□ 0.94
SLC28A1O00337 pRNA.13-201ENST00000619112 90 ntBASIC20.91■□□□□ 0.94
SLC28A1O00337 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC28A1O00337 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SLC28A1O00337 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.9■□□□□ 0.94
SLC28A1O00337 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC28A1O00337 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC28A1O00337 AL031602.1-201ENST00000633169 911 ntBASIC20.9■□□□□ 0.94
SLC28A1O00337 AL035685.1-201ENST00000636663 812 ntBASIC20.9■□□□□ 0.94
SLC28A1O00337 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC28A1O00337 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SLC28A1O00337 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC28A1O00337 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC28A1O00337 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SLC28A1O00337 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC28A1O00337 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC28A1O00337 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A1O00337 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A1O00337 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SLC28A1O00337 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC28A1O00337 AC006455.2-201ENST00000429931 906 ntBASIC20.89■□□□□ 0.93
SLC28A1O00337 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC28A1O00337 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC28A1O00337 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC28A1O00337 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLC28A1O00337 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A1O00337 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A1O00337 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC28A1O00337 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC28A1O00337 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC28A1O00337 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 AC099791.2-201ENST00000605725 427 ntBASIC20.88■□□□□ 0.93
SLC28A1O00337 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC28A1O00337 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A1O00337 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC28A1O00337 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC28A1O00337 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A1O00337 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A1O00337 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 AC079089.2-201ENST00000531211 1277 ntBASIC20.87■□□□□ 0.93
SLC28A1O00337 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A1O00337 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A1O00337 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC28A1O00337 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC28A1O00337 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms