Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 BX842568.3-201ENST00000418104 571 ntBASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC126544.1-201ENST00000580842 1059 ntBASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV4S1A1TA0A5B7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IRS3P-201ENST00000223076 1006 ntBASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 MIR5787-201ENST00000611784 55 ntBASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV4S1A1TA0A5B7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms