Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9d-4A0A0G2JG37 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav9d-4A0A0G2JG37 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-4A0A0G2JG37 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-4A0A0G2JG37 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-4A0A0G2JG37 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms