Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm43530-201ENSMUST00000195920 274 ntBASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm9870-201ENSMUST00000063874 645 ntBASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Golph3-205ENSMUST00000228671 2842 ntBASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Etf1-202ENSMUST00000180351 108 ntBASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms