Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-2A0A0G2JF93 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav13n-2A0A0G2JF93 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13n-2A0A0G2JF93 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13n-2A0A0G2JF93 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-2A0A0G2JF93 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-2A0A0G2JF93 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms