Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Gm9870-201ENSMUST00000063874 645 ntBASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav19A0A0B4J1K4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav19A0A0B4J1K4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav19A0A0B4J1K4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Etf1-202ENSMUST00000180351 108 ntBASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.39□□□□□ -0.11
Trav19A0A0B4J1K4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 AA386476-201ENSMUST00000098781 1665 ntBASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.38□□□□□ -0.11
Trav19A0A0B4J1K4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav19A0A0B4J1K4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav19A0A0B4J1K4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms