Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 AA386476-201ENSMUST00000098781 1665 ntBASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav15d-1-dv6d-1A0A075B624 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.38■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-1-dv6d-1A0A075B624 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms