Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Gm21956-201ENSMUST00000179946 522 ntBASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav1A0A075B5Z4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Gm13241-201ENSMUST00000094493 780 ntBASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav1A0A075B5Z4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.93■□□□□ 0.46
Trav1A0A075B5Z4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav1A0A075B5Z4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav1A0A075B5Z4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav1A0A075B5Z4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav1A0A075B5Z4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav1A0A075B5Z4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav1A0A075B5Z4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms