Protein–RNA interactions for Protein: Q9R226

Khdrbs3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdrbs3Q9R226 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdrbs3Q9R226 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Khdrbs3Q9R226 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Khdrbs3Q9R226 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Khdrbs3Q9R226 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdrbs3Q9R226 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Gm9959-201ENSMUST00000068277 390 ntBASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Khdrbs3Q9R226 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdrbs3Q9R226 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdrbs3Q9R226 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Gm43530-201ENSMUST00000195920 274 ntBASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdrbs3Q9R226 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Khdrbs3Q9R226 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms