Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh5Q9QUM7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh5Q9QUM7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh5Q9QUM7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh5Q9QUM7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh5Q9QUM7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh5Q9QUM7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh5Q9QUM7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh5Q9QUM7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh5Q9QUM7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh5Q9QUM7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh5Q9QUM7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.53■□□□□ 0.72
Msh5Q9QUM7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msh5Q9QUM7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms