Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC005224.4-201ENST00000583262 1652 ntBASIC28.24■■■□□ 2.11
SMARCC1Q92922 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC1Q92922 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC1Q92922 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC1Q92922 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 TSPY20P-201ENST00000450910 630 ntBASIC28.24■■■□□ 2.11
SMARCC1Q92922 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SMARCC1Q92922 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.24■■■□□ 2.11
SMARCC1Q92922 AC007322.1-201ENST00000426983 750 ntBASIC28.23■■■□□ 2.11
SMARCC1Q92922 SLC7A5P2-201ENST00000553010 536 ntBASIC28.23■■■□□ 2.11
SMARCC1Q92922 KRT18P6-201ENST00000555540 1265 ntBASIC28.23■■■□□ 2.11
SMARCC1Q92922 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.23■■■□□ 2.11
SMARCC1Q92922 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC1Q92922 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC1Q92922 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC1Q92922 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SMARCC1Q92922 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMARCC1Q92922 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMARCC1Q92922 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMARCC1Q92922 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.22■■■□□ 2.11
SMARCC1Q92922 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMARCC1Q92922 AC009237.3-201ENST00000393279 1427 ntBASIC28.22■■■□□ 2.11
SMARCC1Q92922 GUSBP6-202ENST00000438529 1198 ntBASIC28.22■■■□□ 2.11
SMARCC1Q92922 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.22■■■□□ 2.11
SMARCC1Q92922 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.22■■■□□ 2.11
SMARCC1Q92922 AC066615.1-201ENST00000640911 628 ntBASIC28.22■■■□□ 2.11
SMARCC1Q92922 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SMARCC1Q92922 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 AC005181.1-201ENST00000604782 1256 ntBASIC28.21■■■□□ 2.11
SMARCC1Q92922 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMARCC1Q92922 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
SMARCC1Q92922 AL353803.4-201ENST00000565882 1934 ntBASIC28.2■■■□□ 2.11
SMARCC1Q92922 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.2■■■□□ 2.1
SMARCC1Q92922 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC1Q92922 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC1Q92922 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.19■■■□□ 2.1
SMARCC1Q92922 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC1Q92922 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC1Q92922 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMARCC1Q92922 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.19■■■□□ 2.1
SMARCC1Q92922 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.19■■■□□ 2.1
SMARCC1Q92922 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.19■■■□□ 2.1
SMARCC1Q92922 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.19■■■□□ 2.1
SMARCC1Q92922 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMARCC1Q92922 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.18■■■□□ 2.1
SMARCC1Q92922 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.18■■■□□ 2.1
SMARCC1Q92922 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.18■■■□□ 2.1
SMARCC1Q92922 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMARCC1Q92922 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC1Q92922 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC1Q92922 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 UBE2DNL-204ENST00000602536 740 ntBASIC28.17■■■□□ 2.1
SMARCC1Q92922 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC1Q92922 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SMARCC1Q92922 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SMARCC1Q92922 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC1Q92922 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.16■■■□□ 2.1
SMARCC1Q92922 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.16■■■□□ 2.1
SMARCC1Q92922 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC1Q92922 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC1Q92922 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC1Q92922 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SMARCC1Q92922 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 SLC29A4P1-201ENST00000398760 971 ntBASIC28.15■■■□□ 2.1
SMARCC1Q92922 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 AL138781.1-201ENST00000566567 1274 ntBASIC28.15■■■□□ 2.1
SMARCC1Q92922 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMARCC1Q92922 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.14■■■□□ 2.1
SMARCC1Q92922 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.14■■■□□ 2.1
SMARCC1Q92922 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms