Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
StrcQ8VIM6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
StrcQ8VIM6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
StrcQ8VIM6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
StrcQ8VIM6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
StrcQ8VIM6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
StrcQ8VIM6 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.62■■□□□ 1.37
StrcQ8VIM6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
StrcQ8VIM6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
StrcQ8VIM6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
StrcQ8VIM6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
StrcQ8VIM6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.59■■□□□ 1.37
StrcQ8VIM6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.59■■□□□ 1.37
StrcQ8VIM6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
StrcQ8VIM6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
StrcQ8VIM6 AA386476-201ENSMUST00000098781 1665 ntBASIC23.57■■□□□ 1.36
StrcQ8VIM6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Gm2559-201ENSMUST00000201323 363 ntBASIC23.57■■□□□ 1.36
StrcQ8VIM6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.57■■□□□ 1.36
StrcQ8VIM6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
StrcQ8VIM6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.56■■□□□ 1.36
StrcQ8VIM6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
StrcQ8VIM6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.55■■□□□ 1.36
StrcQ8VIM6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
StrcQ8VIM6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.54■■□□□ 1.36
StrcQ8VIM6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
StrcQ8VIM6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
StrcQ8VIM6 Gm11249-201ENSMUST00000117071 859 ntBASIC23.53■■□□□ 1.36
StrcQ8VIM6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
StrcQ8VIM6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
StrcQ8VIM6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
StrcQ8VIM6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.53■■□□□ 1.36
StrcQ8VIM6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms