Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd4Q8CC84 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lysmd4Q8CC84 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lysmd4Q8CC84 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lysmd4Q8CC84 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lysmd4Q8CC84 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lysmd4Q8CC84 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lysmd4Q8CC84 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lysmd4Q8CC84 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lysmd4Q8CC84 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.31■□□□□ 0.36
Lysmd4Q8CC84 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms