Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cps1Q8C196 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cps1Q8C196 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cps1Q8C196 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cps1Q8C196 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cps1Q8C196 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Cps1Q8C196 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Cps1Q8C196 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC26.57■■□□□ 1.84
Cps1Q8C196 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
Cps1Q8C196 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Cps1Q8C196 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cps1Q8C196 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cps1Q8C196 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cps1Q8C196 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cps1Q8C196 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
Cps1Q8C196 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
Cps1Q8C196 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cps1Q8C196 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Cps1Q8C196 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cps1Q8C196 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC26.55■■□□□ 1.84
Cps1Q8C196 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cps1Q8C196 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Cps1Q8C196 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cps1Q8C196 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cps1Q8C196 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Cps1Q8C196 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Cps1Q8C196 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC26.53■■□□□ 1.84
Cps1Q8C196 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cps1Q8C196 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cps1Q8C196 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cps1Q8C196 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Gm13509-201ENSMUST00000119733 1308 ntBASIC26.52■■□□□ 1.84
Cps1Q8C196 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Cps1Q8C196 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cps1Q8C196 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Cps1Q8C196 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC26.51■■□□□ 1.83
Cps1Q8C196 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC26.51■■□□□ 1.83
Cps1Q8C196 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cps1Q8C196 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cps1Q8C196 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cps1Q8C196 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cps1Q8C196 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC26.5■■□□□ 1.83
Cps1Q8C196 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Cps1Q8C196 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cps1Q8C196 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Cps1Q8C196 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cps1Q8C196 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC26.49■■□□□ 1.83
Cps1Q8C196 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cps1Q8C196 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Cps1Q8C196 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC26.49■■□□□ 1.83
Cps1Q8C196 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cps1Q8C196 Gm37035-201ENSMUST00000194809 2148 ntBASIC26.48■■□□□ 1.83
Cps1Q8C196 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cps1Q8C196 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cps1Q8C196 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cps1Q8C196 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cps1Q8C196 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Cps1Q8C196 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cps1Q8C196 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cps1Q8C196 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Cps1Q8C196 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cps1Q8C196 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cps1Q8C196 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC26.45■■□□□ 1.83
Cps1Q8C196 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC26.45■■□□□ 1.83
Cps1Q8C196 Gm12896-201ENSMUST00000118430 226 ntBASIC26.45■■□□□ 1.83
Cps1Q8C196 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Cps1Q8C196 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cps1Q8C196 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Cps1Q8C196 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cps1Q8C196 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cps1Q8C196 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC26.44■■□□□ 1.82
Cps1Q8C196 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Cps1Q8C196 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Cps1Q8C196 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC26.44■■□□□ 1.82
Cps1Q8C196 Gm22325-201ENSMUST00000158904 308 ntBASIC26.44■■□□□ 1.82
Cps1Q8C196 Gm6802-201ENSMUST00000167843 1983 ntBASIC26.44■■□□□ 1.82
Cps1Q8C196 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Cps1Q8C196 Mir6982-201ENSMUST00000184354 68 ntBASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms