Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nhlrc1Q8BR37 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nhlrc1Q8BR37 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nhlrc1Q8BR37 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nhlrc1Q8BR37 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nhlrc1Q8BR37 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nhlrc1Q8BR37 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nhlrc1Q8BR37 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Gm12933-201ENSMUST00000120203 872 ntBASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.95□□□□□ -0.02
Nhlrc1Q8BR37 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nhlrc1Q8BR37 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nhlrc1Q8BR37 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Gm10602-201ENSMUST00000098239 609 ntBASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nhlrc1Q8BR37 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Nhlrc1Q8BR37 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nhlrc1Q8BR37 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nhlrc1Q8BR37 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nhlrc1Q8BR37 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms