Protein–RNA interactions for Protein: Q62179

Sema4b, Semaphorin-4B, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4bQ62179 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Sema4bQ62179 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sema4bQ62179 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema4bQ62179 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema4bQ62179 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema4bQ62179 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema4bQ62179 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sema4bQ62179 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sema4bQ62179 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.64■□□□□ 0.9
Sema4bQ62179 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.64■□□□□ 0.89
Sema4bQ62179 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sema4bQ62179 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.64■□□□□ 0.89
Sema4bQ62179 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Sema4bQ62179 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema4bQ62179 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema4bQ62179 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.62■□□□□ 0.89
Sema4bQ62179 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sema4bQ62179 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.62■□□□□ 0.89
Sema4bQ62179 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sema4bQ62179 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema4bQ62179 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema4bQ62179 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Sema4bQ62179 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.61■□□□□ 0.89
Sema4bQ62179 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema4bQ62179 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Sema4bQ62179 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Sema4bQ62179 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sema4bQ62179 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Sema4bQ62179 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sema4bQ62179 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.6■□□□□ 0.89
Sema4bQ62179 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.6■□□□□ 0.89
Sema4bQ62179 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema4bQ62179 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sema4bQ62179 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.59■□□□□ 0.89
Sema4bQ62179 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.59■□□□□ 0.89
Sema4bQ62179 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Gm22238-201ENSMUST00000175222 88 ntBASIC20.59■□□□□ 0.89
Sema4bQ62179 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.59■□□□□ 0.89
Sema4bQ62179 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.59■□□□□ 0.89
Sema4bQ62179 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sema4bQ62179 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.59■□□□□ 0.89
Sema4bQ62179 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.59■□□□□ 0.89
Sema4bQ62179 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Sema4bQ62179 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema4bQ62179 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sema4bQ62179 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema4bQ62179 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.58■□□□□ 0.89
Sema4bQ62179 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms