Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trav3-3Q5R1C3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav3-3Q5R1C3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav3-3Q5R1C3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav3-3Q5R1C3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav3-3Q5R1C3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav3-3Q5R1C3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav3-3Q5R1C3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-3Q5R1C3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav3-3Q5R1C3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3-3Q5R1C3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms