Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Pds5bQ4VA53 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Pds5bQ4VA53 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Pds5bQ4VA53 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
Pds5bQ4VA53 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Pds5bQ4VA53 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Pds5bQ4VA53 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC34.52■■■■□ 3.12
Pds5bQ4VA53 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC34.52■■■■□ 3.12
Pds5bQ4VA53 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC34.52■■■■□ 3.12
Pds5bQ4VA53 AC122428.2-201ENSMUST00000216321 1832 ntBASIC34.52■■■■□ 3.12
Pds5bQ4VA53 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Gm7860-201ENSMUST00000121190 879 ntBASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Pds5bQ4VA53 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Pds5bQ4VA53 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Gm27032-201ENSMUST00000183124 1116 ntBASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Gm44549-201ENSMUST00000208351 577 ntBASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 AC154266.1-201ENSMUST00000223190 503 ntBASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC34.5■■■■□ 3.11
Pds5bQ4VA53 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Pds5bQ4VA53 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Pds5bQ4VA53 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC34.49■■■■□ 3.11
Pds5bQ4VA53 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
Pds5bQ4VA53 Gm27741-201ENSMUST00000185060 237 ntBASIC34.49■■■■□ 3.11
Pds5bQ4VA53 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Pds5bQ4VA53 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC34.47■■■■□ 3.11
Pds5bQ4VA53 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
Pds5bQ4VA53 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Pds5bQ4VA53 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC34.45■■■■□ 3.11
Pds5bQ4VA53 Gm2399-201ENSMUST00000104944 225 ntBASIC34.45■■■■□ 3.11
Pds5bQ4VA53 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pds5bQ4VA53 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pds5bQ4VA53 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pds5bQ4VA53 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Pds5bQ4VA53 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Pds5bQ4VA53 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Pds5bQ4VA53 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC34.43■■■■□ 3.1
Pds5bQ4VA53 Gm8668-201ENSMUST00000120559 1447 ntBASIC34.43■■■■□ 3.1
Pds5bQ4VA53 H2-K2-201ENSMUST00000174250 1049 ntBASIC34.43■■■■□ 3.1
Pds5bQ4VA53 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Pds5bQ4VA53 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
Pds5bQ4VA53 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Pds5bQ4VA53 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Pds5bQ4VA53 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Pds5bQ4VA53 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC34.41■■■■□ 3.1
Pds5bQ4VA53 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC34.41■■■■□ 3.1
Pds5bQ4VA53 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Pds5bQ4VA53 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Pds5bQ4VA53 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Pds5bQ4VA53 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Pds5bQ4VA53 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC34.39■■■■□ 3.1
Pds5bQ4VA53 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pds5bQ4VA53 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms