Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc1aQ3UWR2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.52□□□□□ -0.08
Khdc1aQ3UWR2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc1aQ3UWR2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc1aQ3UWR2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc1aQ3UWR2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Gm10399-202ENSMUST00000202768 748 ntBASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Khdc1aQ3UWR2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Golph3-205ENSMUST00000228671 2842 ntBASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Gm11175-201ENSMUST00000116172 543 ntBASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Khdc1aQ3UWR2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Khdc1aQ3UWR2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Mir6236-201ENSMUST00000184437 123 ntBASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.49□□□□□ -0.09
Khdc1aQ3UWR2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Gm7143-201ENSMUST00000222811 859 ntBASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Khdc1aQ3UWR2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Khdc1aQ3UWR2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Khdc1aQ3UWR2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Khdc1aQ3UWR2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms