Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Gm12821-201ENSMUST00000120022 600 ntBASIC19.65■□□□□ 0.74
Gabpb1Q00420 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gabpb1Q00420 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.65■□□□□ 0.74
Gabpb1Q00420 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Gabpb1Q00420 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.65■□□□□ 0.74
Gabpb1Q00420 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gabpb1Q00420 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.64■□□□□ 0.73
Gabpb1Q00420 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gabpb1Q00420 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gabpb1Q00420 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Mir7075-201ENSMUST00000184187 82 ntBASIC19.63■□□□□ 0.73
Gabpb1Q00420 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.63■□□□□ 0.73
Gabpb1Q00420 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gabpb1Q00420 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gabpb1Q00420 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.62■□□□□ 0.73
Gabpb1Q00420 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gabpb1Q00420 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.61■□□□□ 0.73
Gabpb1Q00420 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.61■□□□□ 0.73
Gabpb1Q00420 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.6■□□□□ 0.73
Gabpb1Q00420 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gabpb1Q00420 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gabpb1Q00420 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.59■□□□□ 0.73
Gabpb1Q00420 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gabpb1Q00420 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Gabpb1Q00420 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gabpb1Q00420 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.58■□□□□ 0.72
Gabpb1Q00420 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms