Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcp4P63054 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcp4P63054 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcp4P63054 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcp4P63054 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcp4P63054 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcp4P63054 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcp4P63054 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcp4P63054 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcp4P63054 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 AC153962.1-201ENSMUST00000218530 1948 ntBASIC13.21□□□□□ -0.3
Pcp4P63054 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcp4P63054 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcp4P63054 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcp4P63054 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcp4P63054 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcp4P63054 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcp4P63054 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.2□□□□□ -0.3
Pcp4P63054 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcp4P63054 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcp4P63054 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcp4P63054 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcp4P63054 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcp4P63054 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Pcp4P63054 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcp4P63054 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcp4P63054 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcp4P63054 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pcp4P63054 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pcp4P63054 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcp4P63054 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcp4P63054 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcp4P63054 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcp4P63054 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms