Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
Zfp42P22227 Rps24-207ENSMUST00000224568 714 ntBASIC20.29■□□□□ 0.84
Zfp42P22227 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Zfp42P22227 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zfp42P22227 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Zfp42P22227 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.29■□□□□ 0.84
Zfp42P22227 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Zfp42P22227 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.28■□□□□ 0.84
Zfp42P22227 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Zfp42P22227 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zfp42P22227 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zfp42P22227 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zfp42P22227 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.28■□□□□ 0.84
Zfp42P22227 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zfp42P22227 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zfp42P22227 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Zfp42P22227 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zfp42P22227 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zfp42P22227 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.27■□□□□ 0.84
Zfp42P22227 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.27■□□□□ 0.84
Zfp42P22227 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Zfp42P22227 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.27■□□□□ 0.83
Zfp42P22227 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zfp42P22227 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zfp42P22227 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Zfp42P22227 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
Zfp42P22227 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.26■□□□□ 0.83
Zfp42P22227 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.26■□□□□ 0.83
Zfp42P22227 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.26■□□□□ 0.83
Zfp42P22227 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
Zfp42P22227 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Zfp42P22227 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zfp42P22227 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.25■□□□□ 0.83
Zfp42P22227 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp42P22227 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp42P22227 Gm14117-201ENSMUST00000122417 843 ntBASIC20.25■□□□□ 0.83
Zfp42P22227 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Zfp42P22227 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp42P22227 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Zfp42P22227 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zfp42P22227 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Zfp42P22227 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp42P22227 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp42P22227 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp42P22227 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp42P22227 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zfp42P22227 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Zfp42P22227 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Gm45102-201ENSMUST00000207427 857 ntBASIC20.23■□□□□ 0.83
Zfp42P22227 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zfp42P22227 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Zfp42P22227 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.23■□□□□ 0.83
Zfp42P22227 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Zfp42P22227 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Zfp42P22227 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Zfp42P22227 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.21■□□□□ 0.83
Zfp42P22227 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Zfp42P22227 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
Zfp42P22227 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Zfp42P22227 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp42P22227 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Zfp42P22227 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp42P22227 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.2■□□□□ 0.82
Zfp42P22227 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp42P22227 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Zfp42P22227 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.2■□□□□ 0.82
Zfp42P22227 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Zfp42P22227 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.2■□□□□ 0.82
Zfp42P22227 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms