Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hcn1O88704 Mir7075-201ENSMUST00000184187 82 ntBASIC18.45■□□□□ 0.54
Hcn1O88704 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hcn1O88704 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcn1O88704 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hcn1O88704 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcn1O88704 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcn1O88704 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Hcn1O88704 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hcn1O88704 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.44■□□□□ 0.54
Hcn1O88704 Mir6236-201ENSMUST00000184437 123 ntBASIC18.44■□□□□ 0.54
Hcn1O88704 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hcn1O88704 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcn1O88704 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.44■□□□□ 0.54
Hcn1O88704 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Hcn1O88704 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Hcn1O88704 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Golph3-205ENSMUST00000228671 2842 ntBASIC18.43■□□□□ 0.54
Hcn1O88704 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hcn1O88704 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gm6139-201ENSMUST00000079261 882 ntBASIC18.43■□□□□ 0.54
Hcn1O88704 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcn1O88704 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.42■□□□□ 0.54
Hcn1O88704 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcn1O88704 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Hcn1O88704 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcn1O88704 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Hcn1O88704 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Hcn1O88704 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcn1O88704 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcn1O88704 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcn1O88704 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.41■□□□□ 0.54
Hcn1O88704 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Gm12251-201ENSMUST00000117893 792 ntBASIC18.41■□□□□ 0.54
Hcn1O88704 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcn1O88704 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hcn1O88704 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hcn1O88704 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hcn1O88704 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcn1O88704 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hcn1O88704 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Hcn1O88704 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hcn1O88704 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hcn1O88704 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hcn1O88704 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcn1O88704 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.38■□□□□ 0.53
Hcn1O88704 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.38■□□□□ 0.53
Hcn1O88704 Gm8493-201ENSMUST00000196881 489 ntBASIC18.38■□□□□ 0.53
Hcn1O88704 Spcs1-204ENSMUST00000226782 949 ntBASIC18.38■□□□□ 0.53
Hcn1O88704 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcn1O88704 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcn1O88704 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.38■□□□□ 0.53
Hcn1O88704 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcn1O88704 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.38■□□□□ 0.53
Hcn1O88704 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn1O88704 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.37■□□□□ 0.53
Hcn1O88704 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms