Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Slc6a20bO88575 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20bO88575 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a20bO88575 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.29■■□□□ 1
Slc6a20bO88575 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.29■■□□□ 1
Slc6a20bO88575 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Slc6a20bO88575 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Gm12896-201ENSMUST00000118430 226 ntBASIC21.29■■□□□ 1
Slc6a20bO88575 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc6a20bO88575 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.29■■□□□ 1
Slc6a20bO88575 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.29■■□□□ 1
Slc6a20bO88575 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a20bO88575 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Slc6a20bO88575 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20bO88575 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Slc6a20bO88575 Gm6576-201ENSMUST00000169678 883 ntBASIC21.28■■□□□ 1
Slc6a20bO88575 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.28■■□□□ 1
Slc6a20bO88575 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc6a20bO88575 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20bO88575 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20bO88575 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a20bO88575 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20bO88575 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20bO88575 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20bO88575 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.27■■□□□ 1
Slc6a20bO88575 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.27■■□□□ 1
Slc6a20bO88575 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20bO88575 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.27■■□□□ 1
Slc6a20bO88575 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc6a20bO88575 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc6a20bO88575 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.27■■□□□ 1
Slc6a20bO88575 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Slc6a20bO88575 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.26■□□□□ 0.99
Slc6a20bO88575 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a20bO88575 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a20bO88575 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a20bO88575 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.24■□□□□ 0.99
Slc6a20bO88575 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Slc6a20bO88575 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.24■□□□□ 0.99
Slc6a20bO88575 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a20bO88575 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc6a20bO88575 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Slc6a20bO88575 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc6a20bO88575 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20bO88575 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20bO88575 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms