Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ube3aO08759 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.87■□□□□ 0.93
Ube3aO08759 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube3aO08759 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.87■□□□□ 0.93
Ube3aO08759 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ube3aO08759 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3aO08759 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3aO08759 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3aO08759 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3aO08759 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.86■□□□□ 0.93
Ube3aO08759 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ube3aO08759 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube3aO08759 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.86■□□□□ 0.93
Ube3aO08759 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3aO08759 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ube3aO08759 Etf1-202ENSMUST00000180351 108 ntBASIC20.85■□□□□ 0.93
Ube3aO08759 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.85■□□□□ 0.93
Ube3aO08759 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3aO08759 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.85■□□□□ 0.93
Ube3aO08759 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3aO08759 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3aO08759 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube3aO08759 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ube3aO08759 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 AA386476-201ENSMUST00000098781 1665 ntBASIC20.84■□□□□ 0.93
Ube3aO08759 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Ube3aO08759 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ube3aO08759 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube3aO08759 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube3aO08759 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.83■□□□□ 0.92
Ube3aO08759 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ube3aO08759 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.82■□□□□ 0.92
Ube3aO08759 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.82■□□□□ 0.92
Ube3aO08759 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ube3aO08759 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ube3aO08759 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube3aO08759 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.81■□□□□ 0.92
Ube3aO08759 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ube3aO08759 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ube3aO08759 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ube3aO08759 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
Ube3aO08759 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Ube3aO08759 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube3aO08759 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ube3aO08759 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.8■□□□□ 0.92
Ube3aO08759 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ube3aO08759 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms