Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv8-28A0A0G2JE47 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Mir6538-201ENSMUST00000183713 110 ntBASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Igkv8-28A0A0G2JE47 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm27502-201ENSMUST00000183495 199 ntBASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Igkv8-28A0A0G2JE47 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm7332-201ENSMUST00000118351 454 ntBASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms