Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gm37179-201ENSMUST00000194862 823 ntBASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.91■□□□□ 0.78
Igkv5-43A0A0B4J1J2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Igkv5-43A0A0B4J1J2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm13534-201ENSMUST00000121169 513 ntBASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Igkv5-43A0A0B4J1J2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Igkv5-43A0A0B4J1J2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms