Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gm27502-201ENSMUST00000183495 199 ntBASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.08■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv13-3A0A0B4J1H2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv13-3A0A0B4J1H2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv13-3A0A0B4J1H2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv13-3A0A0B4J1H2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms