Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-1A0A075B699 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-1A0A075B699 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Rps24-207ENSMUST00000224568 714 ntBASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-1A0A075B699 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Gm45102-201ENSMUST00000207427 857 ntBASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-1A0A075B699 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 AA386476-201ENSMUST00000098781 1665 ntBASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.87□□□□□ -0.03
Trav9d-1A0A075B699 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav9d-1A0A075B699 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms