Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Golph3-205ENSMUST00000228671 2842 ntBASIC13□□□□□ -0.33
Trav13-2A0A075B649 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav13-2A0A075B649 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Gm10399-202ENSMUST00000202768 748 ntBASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-2A0A075B649 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-2A0A075B649 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-2A0A075B649 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-2A0A075B649 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-2A0A075B649 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-2A0A075B649 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-2A0A075B649 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-2A0A075B649 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-2A0A075B649 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-2A0A075B649 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-2A0A075B649 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-2A0A075B649 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms