Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav13d-1A0A075B606 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav13d-1A0A075B606 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav13d-1A0A075B606 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-1A0A075B606 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-1A0A075B606 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Gm10493-201ENSMUST00000097270 612 ntBASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-1A0A075B606 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.11□□□□□ -0.15
Trav13d-1A0A075B606 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-1A0A075B606 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms