Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rcl1Q9JJT0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rcl1Q9JJT0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rcl1Q9JJT0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rcl1Q9JJT0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rcl1Q9JJT0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rcl1Q9JJT0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rcl1Q9JJT0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rcl1Q9JJT0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Gm9847-201ENSMUST00000052528 599 ntBASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rcl1Q9JJT0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Gm13241-201ENSMUST00000094493 780 ntBASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rcl1Q9JJT0 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms