Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Gm10420-201ENSMUST00000121713 882 ntBASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rhox4aQ9D3I8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rhox4aQ9D3I8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rhox4aQ9D3I8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rhox4aQ9D3I8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4aQ9D3I8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4aQ9D3I8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4aQ9D3I8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms