Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.28■□□□□ 0.52
Nkx6-1Q99MA9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx6-1Q99MA9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Nkx6-1Q99MA9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx6-1Q99MA9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.27■□□□□ 0.51
Nkx6-1Q99MA9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx6-1Q99MA9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx6-1Q99MA9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx6-1Q99MA9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx6-1Q99MA9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx6-1Q99MA9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx6-1Q99MA9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Nkx6-1Q99MA9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nkx6-1Q99MA9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Nkx6-1Q99MA9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx6-1Q99MA9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms