Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
RNF25Q96BH1 AL137060.1-201ENST00000618151 2648 ntBASIC22.94■■□□□ 1.26
RNF25Q96BH1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
RNF25Q96BH1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF25Q96BH1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.94■■□□□ 1.26
RNF25Q96BH1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF25Q96BH1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF25Q96BH1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF25Q96BH1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF25Q96BH1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF25Q96BH1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF25Q96BH1 LINC01960-201ENST00000563759 1884 ntBASIC22.92■■□□□ 1.26
RNF25Q96BH1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF25Q96BH1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF25Q96BH1 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
RNF25Q96BH1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.92■■□□□ 1.26
RNF25Q96BH1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF25Q96BH1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF25Q96BH1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF25Q96BH1 AL024507.2-201ENST00000606070 2574 ntBASIC22.92■■□□□ 1.26
RNF25Q96BH1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF25Q96BH1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 AL117332.1-201ENST00000622628 974 ntBASIC22.91■■□□□ 1.26
RNF25Q96BH1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF25Q96BH1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RNF25Q96BH1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF25Q96BH1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF25Q96BH1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RNF25Q96BH1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RNF25Q96BH1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF25Q96BH1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF25Q96BH1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF25Q96BH1 AC092053.2-201ENST00000640557 1818 ntBASIC22.89■■□□□ 1.26
RNF25Q96BH1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.89■■□□□ 1.26
RNF25Q96BH1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF25Q96BH1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF25Q96BH1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF25Q96BH1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF25Q96BH1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF25Q96BH1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RNF25Q96BH1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
RNF25Q96BH1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 GUSBP5-201ENST00000418136 578 ntBASIC22.88■■□□□ 1.25
RNF25Q96BH1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF25Q96BH1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RNF25Q96BH1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF25Q96BH1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF25Q96BH1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RNF25Q96BH1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF25Q96BH1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF25Q96BH1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF25Q96BH1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF25Q96BH1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF25Q96BH1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF25Q96BH1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RNF25Q96BH1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RNF25Q96BH1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms