Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhgb2Q91XX7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb2Q91XX7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb2Q91XX7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhgb2Q91XX7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgb2Q91XX7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Etf1-202ENSMUST00000180351 108 ntBASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb2Q91XX7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb2Q91XX7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb2Q91XX7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb2Q91XX7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms