Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NTF6G-201ENST00000591094 616 ntBASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SHKBP1Q8TBC3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHKBP1Q8TBC3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHKBP1Q8TBC3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.06■■□□□ 1.28
SHKBP1Q8TBC3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 AC004687.1-201ENST00000579003 1625 ntBASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHKBP1Q8TBC3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SHKBP1Q8TBC3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 AC012676.1-201ENST00000574705 1949 ntBASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHKBP1Q8TBC3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 AC004911.1-201ENST00000416316 871 ntBASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.02■■□□□ 1.28
SHKBP1Q8TBC3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
SHKBP1Q8TBC3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SHKBP1Q8TBC3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 AL353803.4-201ENST00000565882 1934 ntBASIC23■■□□□ 1.27
SHKBP1Q8TBC3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHKBP1Q8TBC3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms