Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Vps9d1Q8C190 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps9d1Q8C190 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps9d1Q8C190 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps9d1Q8C190 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Gm22238-201ENSMUST00000175222 88 ntBASIC18.11■□□□□ 0.49
Vps9d1Q8C190 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps9d1Q8C190 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Gm43530-201ENSMUST00000195920 274 ntBASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps9d1Q8C190 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps9d1Q8C190 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps9d1Q8C190 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps9d1Q8C190 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps9d1Q8C190 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps9d1Q8C190 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps9d1Q8C190 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Gm9870-201ENSMUST00000063874 645 ntBASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Vps9d1Q8C190 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps9d1Q8C190 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms