Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.77■□□□□ 0.28
Cdkl3Q8BLF2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Cdkl3Q8BLF2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdkl3Q8BLF2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdkl3Q8BLF2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkl3Q8BLF2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkl3Q8BLF2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Cdkl3Q8BLF2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkl3Q8BLF2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkl3Q8BLF2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdkl3Q8BLF2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms