Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scn3bQ8BHK2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Scn3bQ8BHK2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn3bQ8BHK2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn3bQ8BHK2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn3bQ8BHK2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Scn3bQ8BHK2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn3bQ8BHK2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn3bQ8BHK2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn3bQ8BHK2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn3bQ8BHK2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn3bQ8BHK2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn3bQ8BHK2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn3bQ8BHK2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Gm7143-201ENSMUST00000222811 859 ntBASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn3bQ8BHK2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms