Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Ss18Q62280 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ss18Q62280 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.35□□□□□ -0.11
Ss18Q62280 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Gm15546-201ENSMUST00000122095 826 ntBASIC14.35□□□□□ -0.11
Ss18Q62280 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ss18Q62280 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ss18Q62280 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ss18Q62280 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
Ss18Q62280 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ss18Q62280 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ss18Q62280 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.34□□□□□ -0.11
Ss18Q62280 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.34□□□□□ -0.11
Ss18Q62280 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.34□□□□□ -0.11
Ss18Q62280 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ss18Q62280 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ss18Q62280 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ss18Q62280 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ss18Q62280 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ss18Q62280 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ss18Q62280 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ss18Q62280 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ss18Q62280 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ss18Q62280 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.33□□□□□ -0.12
Ss18Q62280 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.33□□□□□ -0.12
Ss18Q62280 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.33□□□□□ -0.12
Ss18Q62280 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.32□□□□□ -0.12
Ss18Q62280 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ss18Q62280 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ss18Q62280 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.31□□□□□ -0.12
Ss18Q62280 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ss18Q62280 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ss18Q62280 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ss18Q62280 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.31□□□□□ -0.12
Ss18Q62280 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ss18Q62280 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ss18Q62280 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Etf1-202ENSMUST00000180351 108 ntBASIC14.3□□□□□ -0.12
Ss18Q62280 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.3□□□□□ -0.12
Ss18Q62280 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ss18Q62280 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.3□□□□□ -0.12
Ss18Q62280 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ss18Q62280 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.29□□□□□ -0.12
Ss18Q62280 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms