Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col5a2Q3U962 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col5a2Q3U962 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col5a2Q3U962 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col5a2Q3U962 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col5a2Q3U962 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col5a2Q3U962 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.4■■□□□ 1.34
Col5a2Q3U962 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.34
Col5a2Q3U962 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.39■■□□□ 1.34
Col5a2Q3U962 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col5a2Q3U962 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Col5a2Q3U962 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.39■■□□□ 1.34
Col5a2Q3U962 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col5a2Q3U962 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col5a2Q3U962 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col5a2Q3U962 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col5a2Q3U962 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Gm715-201ENSMUST00000117865 831 ntBASIC23.37■■□□□ 1.33
Col5a2Q3U962 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
Col5a2Q3U962 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.36■■□□□ 1.33
Col5a2Q3U962 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col5a2Q3U962 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col5a2Q3U962 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col5a2Q3U962 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col5a2Q3U962 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC23.35■■□□□ 1.33
Col5a2Q3U962 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col5a2Q3U962 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.34■■□□□ 1.33
Col5a2Q3U962 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col5a2Q3U962 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.33■■□□□ 1.33
Col5a2Q3U962 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col5a2Q3U962 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col5a2Q3U962 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Gm6576-201ENSMUST00000169678 883 ntBASIC23.32■■□□□ 1.32
Col5a2Q3U962 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col5a2Q3U962 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col5a2Q3U962 Gm12896-201ENSMUST00000118430 226 ntBASIC23.3■■□□□ 1.32
Col5a2Q3U962 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Col5a2Q3U962 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms