Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.34■□□□□ 0.21
Cpne2P59108 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cpne2P59108 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.34■□□□□ 0.21
Cpne2P59108 Gm10232-201ENSMUST00000089221 720 ntBASIC16.34■□□□□ 0.21
Cpne2P59108 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cpne2P59108 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne2P59108 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne2P59108 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne2P59108 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.33■□□□□ 0.2
Cpne2P59108 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpne2P59108 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cpne2P59108 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.33■□□□□ 0.2
Cpne2P59108 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cpne2P59108 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.33■□□□□ 0.2
Cpne2P59108 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.33■□□□□ 0.2
Cpne2P59108 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne2P59108 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cpne2P59108 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cpne2P59108 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cpne2P59108 Gm10399-202ENSMUST00000202768 748 ntBASIC16.32■□□□□ 0.2
Cpne2P59108 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpne2P59108 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne2P59108 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cpne2P59108 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.31■□□□□ 0.2
Cpne2P59108 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpne2P59108 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpne2P59108 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpne2P59108 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpne2P59108 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cpne2P59108 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne2P59108 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.3■□□□□ 0.2
Cpne2P59108 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpne2P59108 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpne2P59108 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpne2P59108 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpne2P59108 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpne2P59108 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cpne2P59108 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne2P59108 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.29■□□□□ 0.2
Cpne2P59108 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cpne2P59108 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne2P59108 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpne2P59108 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne2P59108 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms