Protein–RNA interactions for Protein: P0DOY1

Dnmt3c, DNA (cytosine-5)-methyltransferase 3C, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3cP0DOY1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dnmt3cP0DOY1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Dnmt3cP0DOY1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dnmt3cP0DOY1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Dnmt3cP0DOY1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dnmt3cP0DOY1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Gm43173-201ENSMUST00000202246 593 ntBASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dnmt3cP0DOY1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dnmt3cP0DOY1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3cP0DOY1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3cP0DOY1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Dnmt3cP0DOY1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dnmt3cP0DOY1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3cP0DOY1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dnmt3cP0DOY1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms