Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ercc1P07903 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.26■□□□□ 0.19
Ercc1P07903 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.26■□□□□ 0.19
Ercc1P07903 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ercc1P07903 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc1P07903 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ercc1P07903 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc1P07903 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc1P07903 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ercc1P07903 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc1P07903 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ercc1P07903 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc1P07903 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.25■□□□□ 0.19
Ercc1P07903 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Gm43566-201ENSMUST00000196851 808 ntBASIC16.24■□□□□ 0.19
Ercc1P07903 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc1P07903 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ercc1P07903 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ercc1P07903 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ercc1P07903 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ercc1P07903 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ercc1P07903 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ercc1P07903 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ercc1P07903 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ercc1P07903 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.21■□□□□ 0.19
Ercc1P07903 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ercc1P07903 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ercc1P07903 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.21■□□□□ 0.19
Ercc1P07903 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ercc1P07903 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ercc1P07903 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ercc1P07903 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ercc1P07903 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Ercc1P07903 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ercc1P07903 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.2■□□□□ 0.18
Ercc1P07903 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ercc1P07903 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.2■□□□□ 0.18
Ercc1P07903 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.2■□□□□ 0.18
Ercc1P07903 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ercc1P07903 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ercc1P07903 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ercc1P07903 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.19■□□□□ 0.18
Ercc1P07903 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ercc1P07903 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ercc1P07903 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.19■□□□□ 0.18
Ercc1P07903 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ercc1P07903 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms